PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG036784t2
Common NameTCM_036784
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family bZIP
Protein Properties Length: 302aa    MW: 33426.9 Da    PI: 5.3986
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG036784t2genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.51.7e-14135187456
                       XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                       lkr rrk +NRe+ArrsR+RK++ ++ Le  +++L +eN++L k+l +  ++ 
  Thecc1EG036784t2 135 LKRLRRKLSNRESARRSRKRKQEHLADLELQAEQLRGENDSLYKQLTNAHQQF 187
                       8******************************************8888776665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-13132196IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.9E-11133187No hitNo description
PROSITE profilePS5021711.082134197IPR004827Basic-leucine zipper domain
PfamPF001705.7E-12134185IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.13E-11135186No hitNo description
CDDcd147023.14E-19137188No hitNo description
PROSITE patternPS000360139154IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MHELVEEMMK QSASELALEE FIRKTMTFSD AKPFPDFDPD TWVAHLSNSF DVFKDHLLHQ  60
NLTPNQSSVT ATLDSQSSIC ENLSSGSPLS GNNPKIRENE VRGATSGSSH EQSDDEEDIE  120
TDPGQCEQSL DPTHLKRLRR KLSNRESARR SRKRKQEHLA DLELQAEQLR GENDSLYKQL  180
TNAHQQFRDA DTNNRVLKSD VEALRAKVKL EEDRLARRTL TCNLNLLQSH LTSPQPIATH  240
NLRMVANVSP TITVHGEDSS YAGLTVSGNS ALGLGNVDIS NGNLNSGIGS DAVSGVSEIW  300
R*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134141LKRLRRKL
2138154RRKLSNRESARRSRKRK
3148154RRSRKRK
4148155RRSRKRKQ
5150155SRKRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX9641836e-38JX964183.1 Gossypium hirsutum clone NBRI_TRANS-452 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007011532.10.0Basic leucine zipper 9, putative isoform 2
SwissprotQ9FUD34e-79BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A061GI060.0A0A061GI06_THECC; Basic leucine zipper 9, putative isoform 2
STRINGVIT_04s0008g02750.t011e-97(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.12e-72basic leucine zipper 9
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]